Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf488 family protein | E1J03_00970 | Not Available | Positive | 223569 - 223925 | 14218.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | E1J03_00975 | Not Available | Positive | 224102 - 225613 | 57025.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | E1J03_00980 | Not Available | Positive | 225638 - 226153 | 19041.9 |
| acyl-coa carboxylase subunit beta | E1J03_00985 | Not Available | Positive | 226156 - 227688 | 55935.1 |
| aminopeptidase | E1J03_00990 | Not Available | Negative | 227821 - 229131 | 50833.6 |
| hypothetical protein | E1J03_00995 | Not Available | Positive | 229236 - 229859 | 24697.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | E1J03_01000 | Not Available | Positive | 229868 - 230431 | 21319.7 |
| duf2795 domain-containing protein | E1J03_01005 | Not Available | Positive | 230503 - 230724 | 8716.91 |
| porin family protein | E1J03_01010 | Not Available | Positive | 230888 - 231496 | 21810.8 |
| primosomal protein n' | E1J03_01015 | Not Available | Positive | 231569 - 234031 | 94038.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

