Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi cotransporter family protein | E1J03_00790 | Not Available | Positive | 190172 - 191863 | 62716.6 |
| na/pi cotransporter family protein | E1J03_00795 | Not Available | Positive | 192007 - 193698 | 63482.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | E1J03_00805 | Not Available | Negative | 195096 - 195962 | 31386.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | E1J03_00810 | Not Available | Negative | 195984 - 196568 | 21446.7 |
| nad-dependent deacylase | E1J03_00815 | Not Available | Positive | 196696 - 197394 | 25753.8 |
| rubredoxin | E1J03_00820 | Not Available | Positive | 197469 - 197633 | 5868.75 |
| polyribonucleotide nucleotidyltransferase | E1J03_00825 | Not Available | Negative | 197816 - 199951 | 78619.8 |
| duf4369 domain-containing protein | E1J03_00830 | Not Available | Positive | 200167 - 201315 | 43016.5 |
| transcription elongation factor grea | E1J03_00835 | Not Available | Positive | 201516 - 201980 | 16808.5 |
| hit family protein | E1J03_00840 | Not Available | Positive | 202033 - 202440 | 15056.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

