Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | E1J03_00740 | Not Available | Negative | 178115 - 179959 | 68261.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | E1J03_00745 | Not Available | Negative | 180040 - 180549 | 17729.0 |
| glycine cleavage system protein gcvh | E1J03_00750 | Not Available | Negative | 180676 - 181056 | 14165.5 |
| phosphatase pap2 family protein | E1J03_00755 | Not Available | Negative | 181093 - 181749 | 24865.9 |
| rna polymerase sigma-54 factor | E1J03_00760 | Not Available | Negative | 181754 - 183223 | 56188.2 |
| aminopeptidase p family protein | E1J03_00765 | Not Available | Positive | 183352 - 184725 | 51419.1 |
| glycyl-radical enzyme activating protein | E1J03_00770 | Not Available | Negative | 184777 - 185685 | 33607.1 |
| glycyl radical protein | E1J03_00775 | Not Available | Negative | 185690 - 188116 | 92040.7 |
| hypothetical protein | E1J03_00780 | Not Available | Positive | 188171 - 188353 | 6915.63 |
| nucleoside kinase | E1J03_00785 | Not Available | Negative | 188417 - 190090 | 64674.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

