Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqge/algh family protein | E1J03_10385 | Not Available | Negative | 2382048 - 2382638 | 22412.9 |
| hypothetical protein | E1J03_10390 | Not Available | Positive | 2382694 - 2382891 | 7930.19 |
| Trna-asp | Not Available | Not Available | Positive | 2382869 - 2382942 | Not Available |
| glycoside hydrolase family 95 protein | E1J03_10405 | Not Available | Positive | 2387508 - 2389967 | 91927.6 |
| iron-sulfur cluster repair di-iron protein | E1J03_10410 | Not Available | Negative | 2390047 - 2390778 | 27844.0 |
| hydroxylamine reductase | E1J03_10415 | Not Available | Negative | 2390790 - 2392448 | 61309.9 |
| crp/fnr family transcriptional regulator | E1J03_10420 | Not Available | Positive | 2392563 - 2393153 | 22010.2 |
| arylsulfatase | E1J03_10425 | Not Available | Negative | 2393431 - 2394978 | 56965.6 |
| hypothetical protein | E1J03_10430 | Not Available | Positive | 2395469 - 2396206 | 27802.8 |
| response regulator transcription factor | E1J03_10435 | Not Available | Positive | 2396427 - 2397104 | 25939.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

