Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4248 domain-containing protein | E1J03_10330 | Not Available | Negative | 2372022 - 2372216 | 7339.02 |
| duf3987 domain-containing protein | E1J03_10335 | Not Available | Negative | 2372417 - 2374222 | 67646.4 |
| virulence protein e | E1J03_10340 | Not Available | Negative | 2374295 - 2374960 | 25304.3 |
| hypothetical protein | E1J03_10345 | Not Available | Positive | 2375234 - 2375431 | 8022.91 |
| dead/deah box helicase | E1J03_10355 | Not Available | Positive | 2375869 - 2378181 | 88695.6 |
| yiha family ribosome biogenesis gtp-binding protein | E1J03_10360 | Not Available | Negative | 2378286 - 2378888 | 23036.9 |
| sodium:solute symporter | E1J03_10365 | Not Available | Negative | 2378854 - 2380335 | 55321.7 |
| recombination protein recr | E1J03_10370 | Not Available | Positive | 2380414 - 2381031 | 22458.3 |
| hypothetical protein | E1J03_10375 | Not Available | Positive | 2381052 - 2381522 | 17770.4 |
| n-acetyltransferase | E1J03_10380 | Not Available | Positive | 2381519 - 2382055 | 20480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

