Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | E1J03_10280 | Not Available | Positive | 2362108 - 2363163 | 39878.7 |
| glycosyltransferase | E1J03_10285 | Not Available | Positive | 2363314 - 2364387 | 40860.4 |
| nad(p)-dependent oxidoreductase | E1J03_10290 | Not Available | Positive | 2364400 - 2365368 | 36371.1 |
| hypothetical protein | E1J03_10295 | Not Available | Positive | 2365365 - 2366231 | 33151.7 |
| nad-dependent epimerase | E1J03_10300 | Not Available | Positive | 2366247 - 2367284 | 38935.5 |
| udp-glucose/gdp-mannose dehydrogenase family protein | E1J03_10305 | Not Available | Positive | 2367295 - 2368608 | 48362.7 |
| hypothetical protein | E1J03_10310 | Not Available | Positive | 2369027 - 2369989 | 36659.6 |
| n-acetylmuramoyl-l-alanine amidase | E1J03_10315 | Not Available | Negative | 2370248 - 2370766 | 19595.7 |
| dna-binding protein | E1J03_10320 | Not Available | Negative | 2371157 - 2371651 | 18040.5 |
| hypothetical protein | E1J03_10325 | Not Available | Negative | 2371691 - 2371921 | 8371.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

