Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain RJX1045
Accession NumberSLTW00000000.1
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidinotransferase | E1J03_05560 | Not Available | + | 1306292 - 1307212 | 35512.7 |
| amidinotransferase | E1J03_05565 | Not Available | + | 1307235 - 1308146 | 34285.0 |
| Gp192 | E1J03_05570 | Not Available | + | 1308161 - 1309396 | 45621.9 |
| Attl | Not Available | Not Available | + | 1309603 - 1309616 | Not Available |
| Hypothetical protein | E1J03_05575 | Not Available | + | 1309695 - 1310381 | 25069.6 |
| Bcepgomrgp35 | E1J03_05580 | Not Available | + | 1310494 - 1311165 | 24863.9 |
| Quef | E1J03_05585 | Not Available | + | 1311385 - 1311840 | 17749.2 |
| Trna-ser; | Not Available | Not Available | + | 1311928 - 1312018 | Not Available |
| transposase | E1J03_05595 | Not Available | + | 1312239 - 1312622 | 14685.6 |
| Isl3 family transposase | E1J03_05600 | Not Available | + | 1312651 - 1313586 | 36314.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
