Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin-binding protein | E1J03_10180 | Not Available | Negative | 2336649 - 2338451 | 66676.1 |
| alpha-xylosidase | E1J03_10185 | Not Available | Negative | 2338457 - 2340703 | 86294.4 |
| right-handed parallel beta-helix repeat-containing protein | E1J03_10190 | Not Available | Negative | 2340768 - 2342732 | 73832.5 |
| transcription termination factor rho | E1J03_10195 | Not Available | Negative | 2342864 - 2344873 | 74345.5 |
| rida family protein | E1J03_10200 | Not Available | Positive | 2345301 - 2345678 | 13268.1 |
| hypothetical protein | E1J03_10205 | Not Available | Positive | 2345841 - 2347031 | 45216.1 |
| mbl fold metallo-hydrolase | E1J03_10210 | Not Available | Positive | 2347041 - 2347832 | 30416.9 |
| lactoylglutathione lyase | E1J03_10215 | Not Available | Positive | 2347850 - 2348227 | 14724.3 |
| duf3805 domain-containing protein | E1J03_10220 | Not Available | Positive | 2348270 - 2349103 | 31649.2 |
| abc transporter atp-binding protein | E1J03_10225 | Not Available | Positive | 2349111 - 2350976 | 72122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

