Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s8 | E1J03_10130 | Not Available | Positive | 2323812 - 2325755 | 70968.9 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_10135 | Not Available | Positive | 2325884 - 2326117 | 8895.39 |
| hypothetical protein | E1J03_10140 | Not Available | Positive | 2326384 - 2326542 | 6014.39 |
| tonb-dependent receptor | E1J03_10145 | Not Available | Positive | 2326661 - 2329819 | 116654.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_10150 | Not Available | Positive | 2329843 - 2331618 | 67423.7 |
| histidine-type phosphatase | E1J03_10155 | Not Available | Positive | 2331633 - 2332913 | 48941.5 |
| methylcobamide--com methyltransferase | E1J03_10160 | Not Available | Positive | 2333063 - 2334073 | 36584.4 |
| methionine synthase | E1J03_10165 | Not Available | Positive | 2334066 - 2334752 | 25368.3 |
| hypothetical protein | E1J03_10170 | Not Available | Negative | 2334852 - 2335037 | 7177.55 |
| na+/glucose cotransporter | E1J03_10175 | Not Available | Negative | 2335044 - 2336615 | 57852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

