Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | E1J03_09975 | Not Available | Negative | 2276086 - 2276853 | 28109.2 |
| dna repair protein recn | E1J03_09980 | Not Available | Negative | 2276941 - 2278602 | 61939.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | E1J03_09985 | Not Available | Negative | 2278707 - 2279903 | 43080.2 |
| 3'-5' exonuclease | E1J03_09990 | Not Available | Negative | 2279900 - 2280676 | 29605.2 |
| dna polymerase iii subunit beta | E1J03_09995 | Not Available | Negative | 2280728 - 2281852 | 41279.3 |
| duf3127 domain-containing protein | E1J03_10000 | Not Available | Positive | 2282006 - 2282383 | 13945.4 |
| duf4270 domain-containing protein | E1J03_10005 | Not Available | Negative | 2282633 - 2284063 | 53508.2 |
| glycogen synthase | E1J03_10010 | Not Available | Negative | 2284083 - 2284907 | 31946.1 |
| pantoate--beta-alanine ligase | E1J03_10015 | Not Available | Positive | 2285259 - 2286107 | 31339.6 |
| aspartate 1-decarboxylase | E1J03_10020 | Not Available | Positive | 2286129 - 2286479 | 12822.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

