Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | E1J03_09870 | Not Available | Positive | 2254424 - 2255644 | 44154.2 |
| histidine kinase | E1J03_09875 | Not Available | Positive | 2255866 - 2256921 | 40285.2 |
| response regulator transcription factor | E1J03_09880 | Not Available | Positive | 2256918 - 2257643 | 27875.9 |
| tryptophan-rich sensory protein | E1J03_09885 | Not Available | Positive | 2257928 - 2258392 | 18041.9 |
| hemerythrin domain-containing protein | E1J03_09890 | Not Available | Positive | 2258519 - 2259214 | 26970.4 |
| response regulator transcription factor | E1J03_09895 | Not Available | Positive | 2259211 - 2259822 | 22695.7 |
| (fe-s)-binding protein | E1J03_09900 | Not Available | Positive | 2260134 - 2260874 | 27306.1 |
| lactate utilization protein | E1J03_09905 | Not Available | Positive | 2260871 - 2262238 | 51683.6 |
| hypothetical protein | E1J03_09910 | Not Available | Positive | 2262241 - 2262828 | 21676.2 |
| hypothetical protein | E1J03_09915 | Not Available | Negative | 2262907 - 2263656 | 26787.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

