Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | E1J03_09820 | Not Available | Negative | 2242605 - 2243783 | 41970.4 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | E1J03_09825 | Not Available | Positive | 2243868 - 2245304 | 52883.7 |
| glucose-6-phosphate dehydrogenase | E1J03_09830 | Not Available | Positive | 2245353 - 2246861 | 58036.4 |
| 6-phosphogluconolactonase | E1J03_09835 | Not Available | Positive | 2246922 - 2247626 | 26380.3 |
| cytochrome d ubiquinol oxidase subunit ii | E1J03_09840 | Not Available | Negative | 2247922 - 2249067 | 42779.6 |
| cytochrome ubiquinol oxidase subunit i | E1J03_09845 | Not Available | Negative | 2249131 - 2250633 | 55090.9 |
| duf4492 domain-containing protein | E1J03_09850 | Not Available | Negative | 2250657 - 2250875 | 8655.77 |
| tolc family protein | E1J03_09855 | Not Available | Positive | 2251029 - 2252372 | 50240.2 |
| efflux rnd transporter periplasmic adaptor subunit | E1J03_09860 | Not Available | Positive | 2252397 - 2253620 | 43933.7 |
| abc transporter atp-binding protein | E1J03_09865 | Not Available | Positive | 2253662 - 2254405 | 27181.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

