Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | E1J03_00520 | Not Available | Negative | 118205 - 119827 | 59867.8 |
| tonb-dependent receptor | E1J03_00525 | Not Available | Negative | 119839 - 122919 | 113481.0 |
| hypothetical protein | E1J03_00530 | Not Available | Negative | 123610 - 124716 | 40883.5 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_00535 | Not Available | Negative | 124734 - 126341 | 60468.7 |
| is4-like element isbf8 family transposase | E1J03_00545 | Not Available | Negative | 129185 - 130630 | 55500.4 |
| glycoside hydrolase family 97 protein | E1J03_00555 | Not Available | Negative | 131116 - 133332 | 84307.1 |
| alpha-amylase | E1J03_00560 | Not Available | Negative | 133374 - 135224 | 70767.9 |
| hypothetical protein | E1J03_00565 | Not Available | Positive | 135473 - 137068 | 62617.9 |
| hypothetical protein | E1J03_00570 | Not Available | Negative | 137761 - 140331 | 93045.3 |
| arac family transcriptional regulator | E1J03_00575 | Not Available | Negative | 140404 - 140889 | 19026.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

