Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase biob | E1J03_09715 | Not Available | Positive | 2219265 - 2220224 | 35644.1 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | E1J03_09720 | Not Available | Positive | 2220263 - 2221534 | 47851.3 |
| 8-amino-7-oxononanoate synthase | E1J03_09725 | Not Available | Positive | 2221562 - 2222713 | 43072.2 |
| duf452 family protein | E1J03_09730 | Not Available | Positive | 2222710 - 2223363 | 25049.2 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | E1J03_09735 | Not Available | Positive | 2223375 - 2224130 | 28879.0 |
| atp-dependent dethiobiotin synthetase biod | E1J03_09740 | Not Available | Positive | 2224145 - 2224789 | 24299.9 |
| glutamine synthetase type iii | E1J03_09745 | Not Available | Negative | 2224906 - 2227095 | 82284.0 |
| ammonium transporter | E1J03_09750 | Not Available | Negative | 2227173 - 2228570 | 50044.3 |
| transcriptional regulator | E1J03_09755 | Not Available | Negative | 2228640 - 2228996 | 13522.4 |
| hypothetical protein | E1J03_09760 | Not Available | Negative | 2229088 - 2229813 | 26012.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

