Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent phosphoribosylglycinamide formyltransferase | E1J03_09660 | Not Available | Positive | 2204113 - 2205282 | 42923.7 |
| cytochrome c biogenesis protein | E1J03_09665 | Not Available | Negative | 2205824 - 2208076 | 86321.5 |
| hypothetical protein | E1J03_09670 | Not Available | Negative | 2208196 - 2209815 | 61475.8 |
| hypothetical protein | E1J03_09675 | Not Available | Negative | 2209836 - 2210033 | 7117.54 |
| peptidase m75 | E1J03_09680 | Not Available | Negative | 2210052 - 2211233 | 42865.0 |
| rhomboid family intramembrane serine protease | E1J03_09690 | Not Available | Negative | 2213238 - 2213906 | 25276.0 |
| 4-alpha-glucanotransferase | E1J03_09695 | Not Available | Positive | 2214087 - 2216027 | 74877.2 |
| glycosyltransferase family 1 protein | E1J03_09700 | Not Available | Positive | 2216042 - 2217307 | 47627.3 |
| alpha-amylase | E1J03_09705 | Not Available | Positive | 2217326 - 2218738 | 53732.4 |
| hypothetical protein | E1J03_09710 | Not Available | Positive | 2218889 - 2219257 | 14096.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

