Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | E1J03_09500 | Not Available | Negative | 2165227 - 2166579 | 49414.7 |
| had family phosphatase | E1J03_09505 | Not Available | Positive | 2166669 - 2167319 | 24626.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | E1J03_09510 | Not Available | Positive | 2167372 - 2168193 | 29522.8 |
| mfs transporter | E1J03_09515 | Not Available | Positive | 2168210 - 2169376 | 43884.8 |
| energy-dependent translational throttle protein etta | E1J03_09520 | Not Available | Positive | 2169457 - 2171145 | 63738.2 |
| tonb-dependent receptor | E1J03_09525 | Not Available | Positive | 2171497 - 2174838 | 123095.0 |
| aaa family atpase | E1J03_09530 | Not Available | Positive | 2174998 - 2176548 | 60522.3 |
| hypothetical protein | E1J03_09535 | Not Available | Negative | 2176645 - 2176959 | 12951.2 |
| n-acetylmuramoyl-l-alanine amidase | E1J03_09540 | Not Available | Negative | 2177129 - 2177545 | 15904.5 |
| dna-binding protein | E1J03_09545 | Not Available | Negative | 2177792 - 2178283 | 17686.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

