Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | E1J03_09450 | Not Available | Negative | 2151889 - 2155026 | 119946.0 |
| helix-turn-helix domain-containing protein | E1J03_09455 | Not Available | Positive | 2155342 - 2156178 | 32672.3 |
| duf417 domain-containing protein | E1J03_09460 | Not Available | Positive | 2156271 - 2156861 | 21415.5 |
| do family serine endopeptidase | E1J03_09465 | Not Available | Positive | 2157182 - 2158705 | 53867.6 |
| rna polymerase sigma factor rpod/siga | E1J03_09470 | Not Available | Positive | 2159211 - 2160071 | 32805.3 |
| hypothetical protein | E1J03_09475 | Not Available | Positive | 2160293 - 2160694 | 15397.0 |
| clostripain | E1J03_09480 | Not Available | Positive | 2160705 - 2161967 | 47174.0 |
| hypothetical protein | E1J03_09485 | Not Available | Negative | 2161951 - 2162349 | 15082.7 |
| divalent metal cation transporter | E1J03_09490 | Not Available | Positive | 2162452 - 2163705 | 45673.9 |
| potassium/proton antiporter | E1J03_09495 | Not Available | Negative | 2163782 - 2165230 | 52852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

