Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | E1J03_09400 | Not Available | Positive | 2133478 - 2135487 | 75632.5 |
| bifunctional metallophosphatase/5'-nucleotidase | E1J03_09405 | Not Available | Positive | 2135492 - 2137234 | 65471.6 |
| hypothetical protein | E1J03_09410 | Not Available | Positive | 2137238 - 2137576 | 12724.8 |
| tonb-dependent receptor | E1J03_09415 | Not Available | Positive | 2137708 - 2140041 | 87085.6 |
| kama family protein | E1J03_09420 | Not Available | Negative | 2140130 - 2142241 | 81999.3 |
| hypothetical protein | E1J03_09425 | Not Available | Negative | 2142316 - 2142525 | 8274.59 |
| six-hairpin glycosidase | E1J03_09430 | Not Available | Positive | 2142561 - 2145872 | 126734.0 |
| hydrolase | E1J03_09435 | Not Available | Positive | 2145924 - 2148680 | 104284.0 |
| glycoside hydrolase family 28 protein | E1J03_09440 | Not Available | Positive | 2148747 - 2150078 | 49505.8 |
| hypothetical protein | E1J03_09445 | Not Available | Positive | 2150087 - 2151427 | 49811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

