Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_09345 | Not Available | Positive | 2123066 - 2123269 | 7668.36 |
| glycoside hydrolase family 28 protein | E1J03_09350 | Not Available | Positive | 2123527 - 2124924 | 51711.0 |
| mechanosensitive ion channel | E1J03_09355 | Not Available | Positive | 2125101 - 2126450 | 50765.5 |
| amp-binding protein | E1J03_09360 | Not Available | Negative | 2126982 - 2128634 | 62225.3 |
| xre family transcriptional regulator | E1J03_09365 | Not Available | Negative | 2128641 - 2129216 | 21449.6 |
| riboflavin synthase | E1J03_09370 | Not Available | Positive | 2129421 - 2130023 | 22635.2 |
| yihy/virulence factor brkb family protein | E1J03_09375 | Not Available | Negative | 2130157 - 2131485 | 50635.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2131511 - 2131880 | Not Available |
| hypothetical protein | E1J03_09390 | Not Available | Negative | 2132157 - 2132444 | 11267.4 |
| j domain-containing protein | E1J03_09395 | Not Available | Negative | 2132460 - 2133431 | 35217.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

