Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | E1J03_09295 | Not Available | Positive | 2112063 - 2113349 | 46244.8 |
| l-lactate permease | E1J03_09300 | Not Available | Positive | 2113611 - 2115110 | 53132.8 |
| duf3037 domain-containing protein | E1J03_09305 | Not Available | Negative | 2115146 - 2115529 | 14756.1 |
| aminotransferase class i and ii | E1J03_09310 | Not Available | Negative | 2115507 - 2116289 | 30077.9 |
| histone h1 | E1J03_09315 | Not Available | Positive | 2116530 - 2116703 | 6352.79 |
| duf5113 domain-containing protein | E1J03_09320 | Not Available | Positive | 2116852 - 2121249 | 168942.0 |
| response regulator transcription factor | E1J03_09325 | Not Available | Positive | 2121279 - 2122007 | 27672.6 |
| transporter | E1J03_09330 | Not Available | Positive | 2121997 - 2122704 | 26623.3 |
| Trna-arg | Not Available | Not Available | Positive | 2122783 - 2122856 | Not Available |
| hypothetical protein | E1J03_09340 | Not Available | Positive | 2122999 - 2123121 | 4346.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

