Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | E1J03_00475 | Not Available | Positive | 105537 - 107051 | 55836.0 |
| duf3109 family protein | E1J03_00480 | Not Available | Positive | 107154 - 107735 | 22154.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 107379 - 107489 | Not Available |
| hypothetical protein | E1J03_00485 | Not Available | Positive | 107803 - 108990 | 44543.9 |
| peptidase | E1J03_00490 | Not Available | Positive | 109258 - 111114 | 67245.1 |
| porv/porq family protein | E1J03_00495 | Not Available | Positive | 111137 - 112117 | 35199.9 |
| arabinogalactan endo-1,4-beta-galactosidase | E1J03_00500 | Not Available | Negative | 112204 - 113346 | 43106.1 |
| alpha-amylase | E1J03_00505 | Not Available | Negative | 113360 - 115441 | 77999.9 |
| duf5115 domain-containing protein | E1J03_00510 | Not Available | Negative | 115573 - 116988 | 51140.5 |
| susf/suse family outer membrane protein | E1J03_00515 | Not Available | Negative | 117011 - 118168 | 41908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

