Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | E1J03_09020 | Not Available | Negative | 2056652 - 2057272 | 23697.4 |
| acetyltransferase | E1J03_09025 | Not Available | Negative | 2057269 - 2057874 | 21618.2 |
| glycosyltransferase family 1 protein | E1J03_09030 | Not Available | Negative | 2057886 - 2059031 | 43074.9 |
| ydcf family protein | E1J03_09035 | Not Available | Negative | 2059028 - 2059786 | 29249.3 |
| hypothetical protein | E1J03_09040 | Not Available | Negative | 2059795 - 2060355 | 21916.2 |
| epsg family protein | E1J03_09050 | Not Available | Negative | 2060658 - 2061767 | 43095.9 |
| glycosyltransferase | E1J03_09055 | Not Available | Negative | 2061770 - 2062786 | 39428.6 |
| glycosyltransferase family 4 protein | E1J03_09060 | Not Available | Negative | 2062783 - 2063934 | 44103.8 |
| glycosyltransferase family 2 protein | E1J03_09065 | Not Available | Negative | 2063931 - 2064965 | 40154.6 |
| glycosyltransferase family 2 protein | E1J03_09070 | Not Available | Negative | 2064962 - 2065900 | 36325.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

