Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | E1J03_08970 | Not Available | Positive | 2047034 - 2048383 | 50358.1 |
| arac family transcriptional regulator | E1J03_08975 | Not Available | Positive | 2048412 - 2049224 | 31287.6 |
| hypothetical protein | E1J03_08980 | Not Available | Negative | 2049263 - 2050111 | 33666.5 |
| hypothetical protein | E1J03_08985 | Not Available | Negative | 2050146 - 2050751 | 23226.7 |
| helix-turn-helix domain-containing protein | E1J03_08990 | Not Available | Negative | 2050748 - 2051896 | 44981.1 |
| hypothetical protein | E1J03_08995 | Not Available | Negative | 2052013 - 2052684 | 25644.9 |
| had family hydrolase | E1J03_09000 | Not Available | Negative | 2052733 - 2053380 | 23962.1 |
| sugar o-acetyltransferase | E1J03_09005 | Not Available | Negative | 2053383 - 2053982 | 21762.3 |
| arac family transcriptional regulator | E1J03_09010 | Not Available | Positive | 2054110 - 2054952 | 33180.0 |
| hypothetical protein | E1J03_09015 | Not Available | Negative | 2055080 - 2055706 | 23797.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

