Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | E1J03_08915 | Not Available | Positive | 2034809 - 2036818 | 77094.7 |
| hypothetical protein | E1J03_08920 | Not Available | Negative | 2036832 - 2037320 | 19034.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | E1J03_08925 | Not Available | Negative | 2037356 - 2038366 | 38436.6 |
| hypothetical protein | E1J03_08930 | Not Available | Negative | 2038378 - 2039079 | 26757.5 |
| duf3945 domain-containing protein | E1J03_08940 | Not Available | Positive | 2039547 - 2040851 | 48351.3 |
| type ia dna topoisomerase | E1J03_08945 | Not Available | Positive | 2040878 - 2042965 | 76783.3 |
| dihydrofolate reductase | E1J03_08950 | Not Available | Negative | 2043063 - 2043581 | 19202.1 |
| dna-binding protein | E1J03_08955 | Not Available | Negative | 2043980 - 2044258 | 11398.0 |
| bifunctional dna primase/helicase | E1J03_08960 | Not Available | Negative | 2044271 - 2046316 | 77137.8 |
| dna-binding protein | E1J03_08965 | Not Available | Negative | 2046279 - 2046638 | 14048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

