Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_08805 | Not Available | Negative | 2016109 - 2016429 | 12622.1 |
| duf3872 domain-containing protein | E1J03_08810 | Not Available | Negative | 2016442 - 2016900 | 17538.9 |
| conjugal transfer protein | E1J03_08815 | Not Available | Negative | 2016914 - 2017495 | 21807.4 |
| conjugative transposon protein tran | E1J03_08820 | Not Available | Negative | 2017499 - 2018434 | 35394.8 |
| conjugative transposon protein tram | E1J03_08825 | Not Available | Negative | 2018468 - 2019784 | 48095.1 |
| duf3989 domain-containing protein | E1J03_08830 | Not Available | Negative | 2019762 - 2020049 | 11215.6 |
| conjugative transposon protein trak | E1J03_08835 | Not Available | Negative | 2020054 - 2020677 | 23883.6 |
| conjugative transposon protein traj | E1J03_08840 | Not Available | Negative | 2020701 - 2021696 | 36794.1 |
| duf4141 domain-containing protein | E1J03_08845 | Not Available | Negative | 2021716 - 2022342 | 23376.3 |
| group ii intron reverse transcriptase/maturase | E1J03_08855 | Not Available | Negative | 2022586 - 2024409 | 71336.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

