Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3876 domain-containing protein | E1J03_08680 | Not Available | Negative | 1998788 - 1999081 | 11263.4 |
| dna-binding protein | E1J03_08685 | Not Available | Negative | 1999068 - 1999382 | 12238.5 |
| tetr/acrr family transcriptional regulator | E1J03_08690 | Not Available | Positive | 1999670 - 2000260 | 22625.4 |
| abc transporter atp-binding protein | E1J03_08695 | Not Available | Positive | 2000384 - 2001232 | 31802.5 |
| abc transporter | E1J03_08700 | Not Available | Positive | 2001229 - 2001891 | 24215.2 |
| hypothetical protein | E1J03_08705 | Not Available | Positive | 2001894 - 2002592 | 26255.5 |
| hypothetical protein | E1J03_08710 | Not Available | Positive | 2002704 - 2002937 | 9003.99 |
| hypothetical protein | E1J03_08715 | Not Available | Positive | 2002912 - 2003334 | 15819.6 |
| dna-binding protein | E1J03_08720 | Not Available | Positive | 2003497 - 2003829 | 13318.9 |
| clindamycin resistance transfer factor btga | E1J03_08730 | Not Available | Positive | 2004114 - 2004698 | 22249.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

