Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | E1J03_00435 | Not Available | Negative | 93521 - 95038 | 57886.3 |
| tonb-dependent receptor | E1J03_00440 | Not Available | Negative | 95059 - 98187 | 116512.0 |
| tetratricopeptide repeat protein | E1J03_00445 | Not Available | Negative | 98411 - 100036 | 63041.8 |
| ribonuclease hii | E1J03_00450 | Not Available | Positive | 100138 - 100743 | 22884.4 |
| l-fucose:h+ symporter permease | E1J03_00455 | Not Available | Negative | 100886 - 102199 | 48513.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 102451 - 103990 | Not Available |
| l-fucose isomerase | E1J03_00460 | Not Available | Negative | 102311 - 104086 | 65624.0 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 104409 - 107300 | Not Available |
| gntr family transcriptional regulator | E1J03_00465 | Not Available | Negative | 104108 - 105088 | 38083.7 |
| hypothetical protein | E1J03_00470 | Not Available | Negative | 105264 - 105476 | 7742.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

