Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | E1J03_08630 | Not Available | Positive | 1980348 - 1981847 | 55429.2 |
| duf4981 domain-containing protein | E1J03_08635 | Not Available | Positive | 1981977 - 1985168 | 122099.0 |
| glycoside hydrolase family 2 | E1J03_08640 | Not Available | Positive | 1985254 - 1988094 | 106384.0 |
| dna-binding protein | E1J03_08645 | Not Available | Positive | 1988242 - 1991472 | 121504.0 |
| sialate o-acetylesterase | E1J03_08650 | Not Available | Positive | 1991490 - 1992914 | 53386.0 |
| hypothetical protein | E1J03_08655 | Not Available | Positive | 1992927 - 1995158 | 85518.5 |
| choloylglycine hydrolase family protein | E1J03_08660 | Not Available | Positive | 1995376 - 1996455 | 39530.2 |
| Trna-lys | Not Available | Not Available | Positive | 1996623 - 1996695 | Not Available |
| site-specific integrase | E1J03_08670 | Not Available | Positive | 1996938 - 1998158 | 46921.2 |
| dna-binding protein | E1J03_08675 | Not Available | Negative | 1998441 - 1998734 | 11503.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

