Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_08470 | Not Available | Negative | 1938283 - 1939815 | 58046.3 |
| acyltransferase | E1J03_08475 | Not Available | Negative | 1939821 - 1940426 | 22521.4 |
| nucleotidyltransferase domain-containing protein | E1J03_08485 | Not Available | Negative | 1941404 - 1941682 | 10290.6 |
| upxy family transcription antiterminator | E1J03_08490 | Not Available | Negative | 1941704 - 1942204 | 18975.6 |
| hypothetical protein | E1J03_08495 | Not Available | Positive | 1942482 - 1942679 | 8129.07 |
| duf3987 domain-containing protein | E1J03_08500 | Not Available | Positive | 1942878 - 1945256 | 89862.2 |
| duf4248 domain-containing protein | E1J03_08505 | Not Available | Negative | 1945407 - 1945637 | 8949.8 |
| hypothetical protein | E1J03_08510 | Not Available | Positive | 1945616 - 1945795 | 6809.52 |
| dna-binding protein | E1J03_08515 | Not Available | Positive | 1945886 - 1946314 | 15594.9 |
| n-acetylmuramoyl-l-alanine amidase | E1J03_08520 | Not Available | Positive | 1946455 - 1946904 | 16917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

