Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4038 domain-containing protein | E1J03_08370 | Not Available | Positive | 1910650 - 1912119 | 56421.5 |
| alpha-rhamnosidase | E1J03_08375 | Not Available | Positive | 1912125 - 1916099 | 149969.0 |
| glycoside hydrolase family 127 protein | E1J03_08380 | Not Available | Positive | 1916326 - 1918431 | 78793.9 |
| right-handed parallel beta-helix repeat-containing protein | E1J03_08385 | Not Available | Positive | 1918456 - 1920279 | 68566.1 |
| alpha-rhamnosidase | E1J03_08390 | Not Available | Positive | 1920294 - 1922438 | 82011.8 |
| hypothetical protein | E1J03_08395 | Not Available | Negative | 1922600 - 1923028 | 17011.3 |
| mannose-1-phosphate guanylyltransferase | E1J03_08400 | Not Available | Negative | 1923032 - 1924075 | 39347.3 |
| gdp-l-fucose synthase | E1J03_08405 | Not Available | Negative | 1924090 - 1925172 | 41077.3 |
| gdp-mannose 4,6-dehydratase | E1J03_08410 | Not Available | Negative | 1925192 - 1926271 | 40921.0 |
| carboxypeptidase regulatory-like domain-containing protein | E1J03_08415 | Not Available | Negative | 1926298 - 1927524 | 43592.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

