Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf721 domain-containing protein | E1J03_08265 | Not Available | Positive | 1890282 - 1890572 | 11239.9 |
| 5-formyltetrahydrofolate cyclo-ligase | E1J03_08270 | Not Available | Negative | 1890745 - 1891275 | 20393.5 |
| s41 family peptidase | E1J03_08275 | Not Available | Negative | 1891199 - 1892944 | 64722.5 |
| dcmp deaminase family protein | E1J03_08280 | Not Available | Negative | 1892959 - 1893393 | 16211.4 |
| duf4847 domain-containing protein | E1J03_08285 | Not Available | Negative | 1893398 - 1893892 | 18504.7 |
| m3 family peptidase | E1J03_08290 | Not Available | Negative | 1893906 - 1895948 | 77750.2 |
| crp/fnr family transcriptional regulator | E1J03_08295 | Not Available | Negative | 1896106 - 1896783 | 25990.6 |
| marc family protein | E1J03_08300 | Not Available | Positive | 1896970 - 1897572 | 22140.0 |
| fad:protein fmn transferase | E1J03_08305 | Not Available | Negative | 1897731 - 1898747 | 37734.4 |
| manganese efflux pump | E1J03_08310 | Not Available | Negative | 1898761 - 1899333 | 21148.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

