Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-bladed beta-propeller | E1J03_08215 | Not Available | Positive | 1882457 - 1883659 | 45057.5 |
| hypothetical protein | E1J03_08220 | Not Available | Positive | 1883679 - 1885421 | 67560.0 |
| pirin family protein | E1J03_08225 | Not Available | Negative | 1885423 - 1886127 | 26318.2 |
| hypothetical protein | E1J03_08230 | Not Available | Negative | 1886400 - 1886675 | 10257.7 |
| hypothetical protein | E1J03_08235 | Not Available | Positive | 1887214 - 1887447 | 9004.78 |
| Trna-gly | Not Available | Not Available | Positive | 1887460 - 1887535 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1887541 - 1887626 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | E1J03_08250 | Not Available | Negative | 1887738 - 1888244 | 18015.5 |
| tetratricopeptide repeat protein | E1J03_08255 | Not Available | Negative | 1888341 - 1889018 | 24522.3 |
| dna replication and repair protein recf | E1J03_08260 | Not Available | Positive | 1889170 - 1890285 | 42992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

