Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | E1J03_00390 | Not Available | Positive | 83175 - 83927 | 27681.6 |
| fe-s cluster assembly protein sufd | E1J03_00395 | Not Available | Positive | 83956 - 85299 | 50503.4 |
| cysteine desulfurase | E1J03_00400 | Not Available | Positive | 85306 - 86520 | 45046.9 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 85457 - 86996 | Not Available |
| hypothetical protein | E1J03_00405 | Not Available | Negative | 86616 - 86801 | 7244.56 |
| hypothetical protein | E1J03_00410 | Not Available | Positive | 86934 - 87206 | 10567.4 |
| glycoside hydrolase | E1J03_00415 | Not Available | Negative | 87281 - 89215 | 73004.8 |
| duf4981 domain-containing protein | E1J03_00420 | Not Available | Negative | 89336 - 92512 | 121536.0 |
| lysine exporter lyso family protein | E1J03_00425 | Not Available | Negative | 92526 - 93128 | 21649.9 |
| duf340 domain-containing protein | E1J03_00430 | Not Available | Negative | 93125 - 93406 | 10217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

