Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4251 domain-containing protein | E1J03_08110 | Not Available | Negative | 1859599 - 1860156 | 20149.2 |
| duf4251 domain-containing protein | E1J03_08115 | Not Available | Negative | 1860390 - 1860947 | 20354.5 |
| mfs transporter | E1J03_08120 | Not Available | Negative | 1861835 - 1863109 | 47721.2 |
| spoiid/lytb domain-containing protein | E1J03_08125 | Not Available | Negative | 1863175 - 1864491 | 49890.8 |
| duf4922 domain-containing protein | E1J03_08130 | Not Available | Negative | 1864548 - 1867019 | 94568.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | E1J03_08135 | Not Available | Positive | 1867106 - 1868155 | 39567.0 |
| duf4837 family protein | E1J03_08140 | Not Available | Positive | 1868180 - 1869244 | 40634.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | E1J03_08145 | Not Available | Positive | 1869272 - 1870372 | 40661.5 |
| ndp-sugar synthase | E1J03_08150 | Not Available | Positive | 1870416 - 1871126 | 26316.7 |
| hypothetical protein | E1J03_08155 | Not Available | Positive | 1871148 - 1872002 | 31676.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

