Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | E1J03_08060 | Not Available | Negative | 1848180 - 1849976 | 67091.1 |
| hypothetical protein | E1J03_08065 | Not Available | Positive | 1850193 - 1850402 | 8443.25 |
| simpl domain-containing protein | E1J03_08070 | Not Available | Negative | 1850493 - 1851194 | 26357.7 |
| n-acetylmuramic acid 6-phosphate etherase | E1J03_08075 | Not Available | Negative | 1851198 - 1852034 | 30366.9 |
| atpase | E1J03_08080 | Not Available | Negative | 1852031 - 1852870 | 30813.0 |
| pectate lyase | E1J03_08085 | Not Available | Positive | 1853119 - 1856250 | 117860.0 |
| response regulator transcription factor | E1J03_08090 | Not Available | Negative | 1856352 - 1857137 | 30204.5 |
| histidine kinase | E1J03_08095 | Not Available | Negative | 1857130 - 1858173 | 40414.5 |
| porin family protein | E1J03_08100 | Not Available | Negative | 1858290 - 1858928 | 24633.5 |
| duf4136 domain-containing protein | E1J03_08105 | Not Available | Negative | 1858941 - 1859573 | 24220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

