Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | E1J03_08005 | Not Available | Negative | 1834803 - 1835348 | 20952.2 |
| hypothetical protein | E1J03_08010 | Not Available | Positive | 1835493 - 1835933 | 16110.3 |
| valine--trna ligase | E1J03_08015 | Not Available | Negative | 1836114 - 1838741 | 99839.8 |
| nucleoside triphosphate pyrophosphohydrolase | E1J03_08020 | Not Available | Positive | 1838849 - 1839637 | 30658.6 |
| tonb-dependent receptor | E1J03_08030 | Not Available | Negative | 1841585 - 1844746 | 117985.0 |
| hypothetical protein | E1J03_08035 | Not Available | Negative | 1845020 - 1845466 | 17649.5 |
| hypothetical protein | E1J03_08040 | Not Available | Negative | 1845478 - 1845804 | 12676.0 |
| rna polymerase sigma factor | E1J03_08045 | Not Available | Negative | 1845899 - 1846450 | 21598.8 |
| ribonuclease z | E1J03_08050 | Not Available | Negative | 1846484 - 1847413 | 35258.8 |
| cold shock domain-containing protein | E1J03_08055 | Not Available | Negative | 1847484 - 1847930 | 16973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

