Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic-type acetolactate synthase large subunit | E1J03_07905 | Not Available | Positive | 1811080 - 1812777 | 61920.7 |
| acetolactate synthase small subunit | E1J03_07910 | Not Available | Positive | 1812788 - 1813342 | 21256.5 |
| acyl-[acyl-carrier-protein] thioesterase | E1J03_07915 | Not Available | Positive | 1813342 - 1814085 | 28553.2 |
| ketol-acid reductoisomerase | E1J03_07920 | Not Available | Positive | 1814120 - 1815163 | 38258.6 |
| energy transducer tonb | E1J03_07925 | Not Available | Positive | 1815291 - 1816376 | 42026.7 |
| sodium ion-translocating decarboxylase subunit beta | E1J03_07930 | Not Available | Negative | 1816470 - 1817684 | 43324.1 |
| lapa family protein | E1J03_07935 | Not Available | Negative | 1817706 - 1818149 | 17061.8 |
| hypothetical protein | E1J03_07940 | Not Available | Negative | 1818304 - 1818711 | 15487.2 |
| peptidylprolyl isomerase | E1J03_07945 | Not Available | Negative | 1818862 - 1820994 | 78798.4 |
| hlyc/corc family transporter | E1J03_07950 | Not Available | Negative | 1821100 - 1822359 | 47672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

