Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase | E1J03_07795 | Not Available | Negative | 1789405 - 1790835 | 55598.2 |
| purine permease | E1J03_07800 | Not Available | Negative | 1790938 - 1792269 | 46612.3 |
| xanthine phosphoribosyltransferase | E1J03_07805 | Not Available | Negative | 1792274 - 1792840 | 20888.7 |
| hypothetical protein | E1J03_07810 | Not Available | Positive | 1793197 - 1793520 | 11743.4 |
| ytxh domain-containing protein | E1J03_07815 | Not Available | Positive | 1793723 - 1793971 | 9401.22 |
| nitroreductase family protein | E1J03_07820 | Not Available | Negative | 1794059 - 1794688 | 23178.1 |
| dipeptidase | E1J03_07825 | Not Available | Negative | 1794701 - 1796053 | 49775.0 |
| chorismate synthase | E1J03_07830 | Not Available | Negative | 1796067 - 1797143 | 39100.8 |
| lema family protein | E1J03_07835 | Not Available | Negative | 1797350 - 1797931 | 21752.9 |
| tpm domain-containing protein | E1J03_07840 | Not Available | Negative | 1797968 - 1798888 | 33426.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

