Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | E1J03_07635 | Not Available | Positive | 1760959 - 1761846 | 33841.0 |
| hypothetical protein | E1J03_07640 | Not Available | Positive | 1761870 - 1762541 | 25594.6 |
| duf4857 domain-containing protein | E1J03_07645 | Not Available | Positive | 1762574 - 1763602 | 39435.4 |
| hypothetical protein | E1J03_07655 | Not Available | Negative | 1764824 - 1765276 | 17837.1 |
| hypothetical protein | E1J03_07660 | Not Available | Negative | 1765767 - 1766156 | 15050.7 |
| penicillin-binding protein | E1J03_07665 | Not Available | Negative | 1766153 - 1767226 | 39078.5 |
| hypothetical protein | E1J03_07670 | Not Available | Negative | 1767236 - 1767586 | 13005.2 |
| hypothetical protein | E1J03_07675 | Not Available | Negative | 1767624 - 1768274 | 25533.6 |
| site-specific integrase | E1J03_07680 | Not Available | Negative | 1768764 - 1769351 | 22548.8 |
| dna repair protein | E1J03_07685 | Not Available | Negative | 1769503 - 1769964 | 17229.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

