Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | E1J03_00345 | Not Available | Positive | 73037 - 74125 | 41847.5 |
| hypothetical protein | E1J03_00350 | Not Available | Positive | 74128 - 74376 | 8732.19 |
| mfs transporter araj | E1J03_00355 | Not Available | Positive | 74589 - 75749 | 41268.0 |
| hypothetical protein | E1J03_00360 | Not Available | Negative | 75710 - 76129 | 15775.0 |
| ribosome maturation factor rimp | E1J03_00365 | Not Available | Positive | 76268 - 76735 | 17916.3 |
| translation initiation factor if-2 | E1J03_00375 | Not Available | Positive | 78035 - 81046 | 111208.0 |
| cvpa family protein | E1J03_00380 | Not Available | Positive | 81185 - 81688 | 18074.1 |
| fe-s cluster assembly protein sufb | E1J03_00385 | Not Available | Positive | 81696 - 83147 | 54039.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 81958 - 82068 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 82147 - 85038 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

