Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | E1J03_07585 | Not Available | Positive | 1748562 - 1750358 | 66435.6 |
| class i sam-dependent methyltransferase | E1J03_07590 | Not Available | Positive | 1750371 - 1750991 | 23243.4 |
| abc transporter atp-binding protein | E1J03_07595 | Not Available | Positive | 1751003 - 1752733 | 63885.4 |
| hypothetical protein | E1J03_07600 | Not Available | Negative | 1752998 - 1753363 | 14053.1 |
| hypothetical protein | E1J03_07605 | Not Available | Negative | 1753462 - 1753752 | 11299.0 |
| tonb-dependent receptor | E1J03_07610 | Not Available | Positive | 1754207 - 1756942 | 103849.0 |
| duf4876 domain-containing protein | E1J03_07615 | Not Available | Positive | 1756964 - 1758178 | 44704.4 |
| hypothetical protein | E1J03_07620 | Not Available | Positive | 1758193 - 1759767 | 58358.5 |
| hypothetical protein | E1J03_07625 | Not Available | Positive | 1759788 - 1760372 | 20951.8 |
| peptidase | E1J03_07630 | Not Available | Positive | 1760356 - 1760931 | 21635.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

