Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase family protein | E1J03_07485 | Not Available | Positive | 1732448 - 1733266 | 30875.1 |
| sdr family oxidoreductase | E1J03_07490 | Not Available | Positive | 1733271 - 1734029 | 27313.0 |
| alpha-amlyase | E1J03_07495 | Not Available | Negative | 1734121 - 1734369 | 9265.28 |
| sodium ion-translocating decarboxylase subunit beta | E1J03_07500 | Not Available | Negative | 1734544 - 1735704 | 40880.4 |
| biotin/lipoyl-binding protein | E1J03_07505 | Not Available | Negative | 1735706 - 1736137 | 15168.5 |
| lamin tail domain-containing protein | E1J03_07510 | Not Available | Negative | 1736161 - 1737090 | 34142.0 |
| acyl-coa carboxylase subunit beta | E1J03_07515 | Not Available | Negative | 1737118 - 1738671 | 56487.9 |
| methylmalonyl-coa epimerase | E1J03_07520 | Not Available | Negative | 1738774 - 1739187 | 14910.1 |
| gnat family n-acetyltransferase | E1J03_07525 | Not Available | Negative | 1739344 - 1740366 | 40101.1 |
| nad(p)h nitroreductase | E1J03_07530 | Not Available | Positive | 1740412 - 1740948 | 20005.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

