Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | E1J03_07430 | Not Available | Negative | 1721470 - 1722702 | 47439.8 |
| endonuclease muts2 | E1J03_07435 | Not Available | Negative | 1722966 - 1725476 | 95307.7 |
| Trna-ser | Not Available | Not Available | Positive | 1725623 - 1725710 | Not Available |
| ph domain-containing protein | E1J03_07450 | Not Available | Negative | 1726609 - 1727052 | 16703.8 |
| hypothetical protein | E1J03_07455 | Not Available | Negative | 1727211 - 1727519 | 12237.0 |
| hypothetical protein | E1J03_07460 | Not Available | Positive | 1728024 - 1728206 | 7414.17 |
| crp/fnr family transcriptional regulator | E1J03_07465 | Not Available | Positive | 1728187 - 1728750 | 22255.1 |
| acyltransferase | E1J03_07470 | Not Available | Positive | 1728868 - 1730019 | 43030.7 |
| transcriptional repressor | E1J03_07475 | Not Available | Negative | 1730193 - 1730618 | 16165.6 |
| heavy metal translocating p-type atpase | E1J03_07480 | Not Available | Negative | 1730641 - 1732350 | 62101.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

