Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphatase | E1J03_07375 | Not Available | Negative | 1709068 - 1710231 | 44587.1 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_07380 | Not Available | Negative | 1710279 - 1711793 | 56840.2 |
| susc/raga family tonb-linked outer membrane protein | E1J03_07385 | Not Available | Negative | 1711812 - 1715201 | 126928.0 |
| fecr family protein | E1J03_07390 | Not Available | Negative | 1715217 - 1716386 | 44665.8 |
| rna polymerase sigma-70 factor | E1J03_07395 | Not Available | Negative | 1716489 - 1717040 | 21561.7 |
| adenylate kinase | E1J03_07400 | Not Available | Negative | 1717311 - 1717826 | 20084.4 |
| n-acetyltransferase | E1J03_07405 | Not Available | Negative | 1717864 - 1718448 | 23265.7 |
| class i sam-dependent methyltransferase | E1J03_07410 | Not Available | Negative | 1718450 - 1719199 | 28920.5 |
| mobilization protein | E1J03_07415 | Not Available | Negative | 1719464 - 1720747 | 49120.7 |
| hypothetical protein | E1J03_07420 | Not Available | Negative | 1720898 - 1721128 | 8698.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

