Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | E1J03_07325 | Not Available | Positive | 1697898 - 1699079 | 43664.5 |
| Trna-glu | Not Available | Not Available | Positive | 1699426 - 1699500 | Not Available |
| hypothetical protein | E1J03_07335 | Not Available | Positive | 1699643 - 1700932 | 48217.7 |
| deoxyribonuclease iv | E1J03_07340 | Not Available | Positive | 1700975 - 1701811 | 31472.6 |
| trpb-like pyridoxal phosphate-dependent enzyme | E1J03_07345 | Not Available | Negative | 1702134 - 1703498 | 50210.1 |
| potassium transporter | E1J03_07350 | Not Available | Positive | 1703676 - 1705523 | 68679.0 |
| trka family potassium uptake protein | E1J03_07355 | Not Available | Positive | 1705526 - 1706212 | 25683.0 |
| duf4738 domain-containing protein | E1J03_07360 | Not Available | Positive | 1706428 - 1706997 | 21139.5 |
| hypothetical protein | E1J03_07365 | Not Available | Positive | 1707090 - 1707530 | 16624.2 |
| l-serine ammonia-lyase | E1J03_07370 | Not Available | Negative | 1707710 - 1708918 | 43966.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

