Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hotdog fold thioesterase | E1J03_07275 | Not Available | Negative | 1682080 - 1682487 | 14546.4 |
| slc13 family permease | E1J03_07280 | Not Available | Positive | 1682676 - 1684538 | 67164.1 |
| mate family efflux transporter | E1J03_07285 | Not Available | Negative | 1684501 - 1685856 | 49626.2 |
| pyridine nucleotide-disulfide oxidoreductase | E1J03_07290 | Not Available | Positive | 1686093 - 1688594 | 90628.5 |
| marr family transcriptional regulator | E1J03_07295 | Not Available | Positive | 1688628 - 1688957 | 12279.9 |
| clc family h(+)/cl(-) exchange transporter | E1J03_07300 | Not Available | Positive | 1688990 - 1690588 | 59634.0 |
| epoxyqueuosine reductase queh | E1J03_07305 | Not Available | Positive | 1690598 - 1691188 | 22935.3 |
| arac family transcriptional regulator | E1J03_07310 | Not Available | Positive | 1691185 - 1693002 | 70512.2 |
| susc/raga family tonb-linked outer membrane protein | E1J03_07315 | Not Available | Positive | 1693195 - 1696446 | 121660.0 |
| starch-binding protein | E1J03_07320 | Not Available | Positive | 1696458 - 1697879 | 53571.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

