Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | E1J03_07220 | Not Available | Negative | 1669209 - 1671152 | 71615.3 |
| virulence protein e | E1J03_07225 | Not Available | Negative | 1671156 - 1671725 | 21633.0 |
| hypothetical protein | E1J03_07230 | Not Available | Positive | 1671911 - 1672378 | 16988.2 |
| duf4250 domain-containing protein | E1J03_07240 | Not Available | Positive | 1674826 - 1675002 | 6921.42 |
| arac family transcriptional regulator | E1J03_07245 | Not Available | Negative | 1675065 - 1675949 | 34402.3 |
| o-succinylbenzoic acid--coa ligase | E1J03_07250 | Not Available | Negative | 1676205 - 1677290 | 40530.2 |
| o-succinylbenzoate synthase | E1J03_07255 | Not Available | Negative | 1677287 - 1678342 | 39920.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | E1J03_07260 | Not Available | Negative | 1678420 - 1679241 | 30339.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | E1J03_07265 | Not Available | Negative | 1679241 - 1680914 | 62978.0 |
| isochorismate synthase | E1J03_07270 | Not Available | Negative | 1680941 - 1682083 | 43195.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

