Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | E1J03_07165 | Not Available | Positive | 1659362 - 1660384 | 39892.1 |
| glycosyltransferase | E1J03_07170 | Not Available | Positive | 1660578 - 1661795 | 46644.1 |
| glycosyltransferase | E1J03_07175 | Not Available | Positive | 1661796 - 1662893 | 41472.7 |
| udp-galactopyranose mutase | E1J03_07180 | Not Available | Positive | 1662897 - 1664021 | 43269.1 |
| hypothetical protein | E1J03_07185 | Not Available | Positive | 1664142 - 1665044 | 35153.5 |
| undecaprenyl-phosphate glucose phosphotransferase | E1J03_07195 | Not Available | Positive | 1665433 - 1666848 | 54734.4 |
| hypothetical protein | E1J03_07200 | Not Available | Positive | 1666880 - 1667095 | 7668.74 |
| n-acetylmuramoyl-l-alanine amidase | E1J03_07205 | Not Available | Negative | 1667316 - 1667834 | 19703.7 |
| dna-binding protein | E1J03_07210 | Not Available | Negative | 1668145 - 1668684 | 19200.7 |
| duf4248 domain-containing protein | E1J03_07215 | Not Available | Negative | 1668967 - 1669191 | 8370.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

