Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upxy family transcription antiterminator | E1J03_07115 | Not Available | Positive | 1646549 - 1647199 | 24635.1 |
| hypothetical protein | E1J03_07120 | Not Available | Positive | 1647218 - 1647652 | 16553.6 |
| polysaccharide export protein | E1J03_07125 | Not Available | Positive | 1647678 - 1648478 | 29370.8 |
| polysaccharide biosynthesis tyrosine autokinase | E1J03_07130 | Not Available | Positive | 1648516 - 1650918 | 89794.7 |
| polysaccharide biosynthesis protein | E1J03_07135 | Not Available | Positive | 1651073 - 1652602 | 57147.1 |
| nad-dependent epimerase/dehydratase family protein | E1J03_07140 | Not Available | Positive | 1652599 - 1653741 | 44703.2 |
| 4fe-4s dicluster domain-containing protein | E1J03_07145 | Not Available | Positive | 1653757 - 1655571 | 69192.6 |
| polysaccharide pyruvyl transferase family protein | E1J03_07150 | Not Available | Positive | 1655492 - 1656838 | 52775.8 |
| acyltransferase | E1J03_07155 | Not Available | Positive | 1656841 - 1657893 | 41048.7 |
| hypothetical protein | E1J03_07160 | Not Available | Positive | 1658305 - 1659174 | 33161.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

