Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloproteinase | E1J03_06905 | Not Available | Positive | 1600254 - 1600691 | 16695.8 |
| relaxase | E1J03_06910 | Not Available | Positive | 1600688 - 1601920 | 46497.8 |
| hypothetical protein | E1J03_06915 | Not Available | Positive | 1601927 - 1602463 | 19787.2 |
| integrase | E1J03_06920 | Not Available | Positive | 1602491 - 1602913 | 16450.0 |
| non-ribosomal peptide synthetase | E1J03_06925 | Not Available | Positive | 1603378 - 1609542 | 235468.0 |
| 4'-phosphopantetheinyl transferase superfamily protein | E1J03_06930 | Not Available | Positive | 1609545 - 1610135 | 22271.2 |
| tonb-dependent receptor | E1J03_06935 | Not Available | Positive | 1610174 - 1612546 | 90542.5 |
| hypothetical protein | E1J03_06940 | Not Available | Positive | 1612584 - 1613771 | 44540.6 |
| hypothetical protein | E1J03_06945 | Not Available | Negative | 1614129 - 1614413 | 10274.0 |
| nad-dependent epimerase/dehydratase family protein | E1J03_06950 | Not Available | Positive | 1614462 - 1615544 | 41049.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

